Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909848.1_cds_XP_016459942.1_53416
CDS Infomation

[gene=LOC107783481] [db_xref=GeneID:107783481] [protein=fatty acyl-CoA reductase 3-like] [protein_id=XP_016459942.1] [location=complement(join(25706..25853,25979..26106,30065..30340,30489..30570,30925..31086,32333..32525,32653..32753,32906..33111,33624..33727,33845..33923))] [gbkey=CDS]
Sequence

ATGGAATCATCTAAAATTCAACAATTTCTAGAAGGCAAAATTATTTTCATTACGGGTGCC
ACGGGTTTCCTTGCAAAAATTTTGGTGGAGAAGATACTTCGGGTTCAACCAAACGTGAAA
AAGTTATACCTTCTAGTAAGAGCTTCGGACACCAAATCAGCCAAGAAACGTTTTTATGAA
GAGATTATGCAGACTGAATTGTTTAAGGTTCTAAGAGAAAAGATAGGTGCAAAAAACCTA
AACTCTCTCGTAGAAGAGAAGGTATTTCCAGTTGCCGGTGATATTTCATTTGAGGATTTT
GGAATTGAAAATTCGGAGATAAAAGATGAAATGTTCAAAGAAATCGAAATAATTATAAAC
TCAGCTGCAACTACTAGATTTGATGAGAGATATGATATTGCCATGAATATCAATGTCCTA
GGTGCCGTCAACGTCCTCAAGTTTGCTAAAAGATGTGAAAAAGTGAAGATTATTGTTCAC
GTATCCACTGCTTATGTTTGTGGGGAAGGGGAAGGAGTTATACCAGAGAAATCATTCATT
TTGGGTGAGACACTCAACAAAAACTCCTACTTAGACATTGATGTGGAGAGGAAGGTGATA
GAAGACAAACTTAAGGAACTTGAAGCTCAAAAATTGACATCAAAGGAAGTGACGATAGCC
ATGAAAGACCTTGGCATTCAAAGGGCAACTTTGCATGGGTGGCCAAACACATATTCCTTC
ACAAAGGCAATGGGAGAGATGCTTTTAGGACATTTGAAAGAGAATTTACAACTTGTTATA
ATACGTCCAACAATTATCACTAGCACTTATAAAGAGCCATTTCCAGGATGGATTGAAGGA
GTCAAAACAGTGGATTCATTTATCTTGGGATATGGTAAAGGCATATTGAATTTCTGCTTT
GGTGACCCAAACACAAAAATAGACGCGATTCCAGGTGATATGGTGGTGAACTCCATACTT
GCAGCAATTATAGCACATGGAAATCAATATTATTCTTCTCAAGAATCAATATATCACATT
AGCTCTTCCGAAAAAAATCCTCTAAAATCTTGTGATATTCAATTGTTTCTGTTTCATTCC
TTCACCAAAAATCCATGGATCAACAAAGATGGGAACATCATCAAAGTGGGAATGCCTCCG
CTATTTAGCAGCATGGATAGCTTTCAAAATTACATTTCAACCTATTATTGGCCATTGTTA
AAGATACTAGAGTTGGCAAATCTATTATCATGGCAGCGTTTTGACAAAACCTACAAAAAT
TTGAAAAGGAAGATTGATATGGCTATACGTCTAGCTGAACTCTACAAACCTTACTTGCTT
TTCCACGGCAGCTTTGATGACGTTAATACCGAGAGGTTGAGAATGGCAATGAAAGATTGC
AACATAGAAGATGTGCTCAGCTTTGATCCAAGATGCATTAAATGGGAAGATTACTTCATG
AATACTCATTTCCCCGGAGCTGTAAAGCGCATATTCTAG

Peptide Sequence

PEP ID

XP_016459942.1
PEP Infomation

PREDICTED: fatty acyl-CoA reductase 3-like [Nicotiana tabacum]
Sequence

MESSKIQQFLEGKIIFITGATGFLAKILVEKILRVQPNVKKLYLLVRASDTKSAKKRFYE
EIMQTELFKVLREKIGAKNLNSLVEEKVFPVAGDISFEDFGIENSEIKDEMFKEIEIIIN
SAATTRFDERYDIAMNINVLGAVNVLKFAKRCEKVKIIVHVSTAYVCGEGEGVIPEKSFI
LGETLNKNSYLDIDVERKVIEDKLKELEAQKLTSKEVTIAMKDLGIQRATLHGWPNTYSF
TKAMGEMLLGHLKENLQLVIIRPTIITSTYKEPFPGWIEGVKTVDSFILGYGKGILNFCF
GDPNTKIDAIPGDMVVNSILAAIIAHGNQYYSSQESIYHISSSEKNPLKSCDIQLFLFHS
FTKNPWINKDGNIIKVGMPPLFSSMDSFQNYISTYYWPLLKILELANLLSWQRFDKTYKN
LKRKIDMAIRLAELYKPYLLFHGSFDDVNTERLRMAMKDCNIEDVLSFDPRCIKWEDYFM
NTHFPGAVKRIF

Transcript Sequence

Gene sequence data has not been registered.